Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITCHQ96J02 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ITCHQ96J02 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ITCHQ96J02 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ITCHQ96J02 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ITCHQ96J02 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ITCHQ96J02 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ITCHQ96J02 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.53■□□□□ 0.08
ITCHQ96J02 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.53■□□□□ 0.08
ITCHQ96J02 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.53■□□□□ 0.08
ITCHQ96J02 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.53■□□□□ 0.08
ITCHQ96J02 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
ITCHQ96J02 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.53■□□□□ 0.08
ITCHQ96J02 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.53■□□□□ 0.08
ITCHQ96J02 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.53■□□□□ 0.08
ITCHQ96J02 OR7E47P-204ENST00000575924 449 ntBASIC15.53■□□□□ 0.08
ITCHQ96J02 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.53■□□□□ 0.08
ITCHQ96J02 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ITCHQ96J02 AL031055.1-201ENST00000606362 631 ntBASIC15.53■□□□□ 0.08
ITCHQ96J02 ACTL9-202ENST00000612068 1252 ntBASIC15.53■□□□□ 0.08
ITCHQ96J02 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.53■□□□□ 0.08
ITCHQ96J02 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ITCHQ96J02 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.53■□□□□ 0.08
ITCHQ96J02 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ITCHQ96J02 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.52■□□□□ 0.08
ITCHQ96J02 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ITCHQ96J02 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ITCHQ96J02 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.52■□□□□ 0.08
ITCHQ96J02 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.52■□□□□ 0.08
ITCHQ96J02 LINC02228-204ENST00000642115 2962 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.52■□□□□ 0.08
ITCHQ96J02 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ITCHQ96J02 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ITCHQ96J02 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.52■□□□□ 0.08
ITCHQ96J02 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ITCHQ96J02 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.52■□□□□ 0.08
ITCHQ96J02 AC016027.1-202ENST00000607927 1699 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ITCHQ96J02 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ITCHQ96J02 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ITCHQ96J02 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ITCHQ96J02 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ITCHQ96J02 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
ITCHQ96J02 PMS2P4-201ENST00000412466 1052 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.52■□□□□ 0.08
ITCHQ96J02 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 AC108073.2-201ENST00000464002 357 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.52■□□□□ 0.08
ITCHQ96J02 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.52■□□□□ 0.08
ITCHQ96J02 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ITCHQ96J02 MIR3909-201ENST00000579518 119 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.52■□□□□ 0.08
ITCHQ96J02 IFNL4P1-201ENST00000607083 540 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ITCHQ96J02 AC004790.2-201ENST00000623588 572 ntBASIC15.52■□□□□ 0.08
ITCHQ96J02 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ITCHQ96J02 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ITCHQ96J02 AC073347.1-201ENST00000421633 2643 ntBASIC15.52■□□□□ 0.07
ITCHQ96J02 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.52■□□□□ 0.07
ITCHQ96J02 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
ITCHQ96J02 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ITCHQ96J02 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ITCHQ96J02 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ITCHQ96J02 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
ITCHQ96J02 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ITCHQ96J02 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms