Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 U82695.1-201ENST00000635752 1889 ntBASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AC006058.4-201ENST00000624016 1670 ntBASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 FGFR3P6-201ENST00000457012 610 ntBASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AF186996.4-201ENST00000467186 377 ntBASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AL031008.1-201ENST00000619963 541 ntBASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 AL805961.1-202ENST00000641562 540 ntBASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXRED1Q96CU9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
FOXRED1Q96CU9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 SLC25A6P2-201ENST00000497974 877 ntBASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 AF238378.1-201ENST00000526806 358 ntBASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 AL160237.2-201ENST00000556165 472 ntBASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms