Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 AP002414.1-201ENST00000391405 1147 ntBASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 AC092865.6-201ENST00000642101 219 ntBASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 AC073347.1-201ENST00000421633 2643 ntBASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRAMD1AQ96CP6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 ALG1L5P-201ENST00000482043 771 ntBASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 PDPK2P-202ENST00000562415 1191 ntBASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 AL139011.1-202ENST00000642063 584 ntBASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 LINC02228-204ENST00000642115 2962 ntBASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GRAMD1AQ96CP6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 CEND1P1-201ENST00000451006 455 ntBASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 AC004790.2-201ENST00000623588 572 ntBASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.73■□□□□ 0.27
GRAMD1AQ96CP6 AC007064.4-201ENST00000637740 555 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms