Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE4Q96A23 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.62□□□□□ -0.07
CPNE4Q96A23 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 TCAF2P1-201ENST00000291129 2421 ntBASIC14.61□□□□□ -0.07
CPNE4Q96A23 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 AL139400.1-201ENST00000366220 510 ntBASIC14.61□□□□□ -0.07
CPNE4Q96A23 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 AC067863.1-201ENST00000494933 530 ntBASIC14.61□□□□□ -0.07
CPNE4Q96A23 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 AC015911.4-201ENST00000588022 1070 ntBASIC14.61□□□□□ -0.07
CPNE4Q96A23 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE4Q96A23 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE4Q96A23 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AL353705.2-201ENST00000428243 662 ntBASIC14.6□□□□□ -0.07
CPNE4Q96A23 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 FAM86GP-201ENST00000448322 971 ntBASIC14.6□□□□□ -0.07
CPNE4Q96A23 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AC109322.1-201ENST00000524499 1264 ntBASIC14.6□□□□□ -0.07
CPNE4Q96A23 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AC069262.1-201ENST00000539058 672 ntBASIC14.6□□□□□ -0.07
CPNE4Q96A23 AC018529.1-201ENST00000613063 361 ntBASIC14.6□□□□□ -0.07
CPNE4Q96A23 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 MIR6080-201ENST00000617359 66 ntBASIC14.6□□□□□ -0.07
CPNE4Q96A23 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AC093028.1-201ENST00000622998 982 ntBASIC14.6□□□□□ -0.07
CPNE4Q96A23 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CPNE4Q96A23 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE4Q96A23 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms