Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF4Q92544 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 TSPY16P-201ENST00000449843 468 ntBASIC15.39■□□□□ 0.05
TM9SF4Q92544 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 ALG1L8P-201ENST00000533887 760 ntBASIC15.39■□□□□ 0.05
TM9SF4Q92544 SLC25A39P2-201ENST00000537614 270 ntBASIC15.39■□□□□ 0.05
TM9SF4Q92544 AP000842.3-202ENST00000569238 1080 ntBASIC15.39■□□□□ 0.05
TM9SF4Q92544 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 AL390754.1-201ENST00000619088 582 ntBASIC15.39■□□□□ 0.05
TM9SF4Q92544 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.39■□□□□ 0.05
TM9SF4Q92544 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF4Q92544 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 FO538757.1-201ENST00000623083 1397 ntBASIC15.38■□□□□ 0.05
TM9SF4Q92544 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 AC131009.4-201ENST00000624048 1740 ntBASIC15.38■□□□□ 0.05
TM9SF4Q92544 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 AC008677.1-201ENST00000519230 1561 ntBASIC15.38■□□□□ 0.05
TM9SF4Q92544 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 TREML5P-201ENST00000421694 576 ntBASIC15.38■□□□□ 0.05
TM9SF4Q92544 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.38■□□□□ 0.05
TM9SF4Q92544 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TM9SF4Q92544 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TM9SF4Q92544 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TM9SF4Q92544 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.37■□□□□ 0.05
TM9SF4Q92544 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TM9SF4Q92544 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TM9SF4Q92544 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TM9SF4Q92544 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TM9SF4Q92544 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms