Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 AC074044.1-201ENST00000609673 707 ntBASIC16.23■□□□□ 0.19
HMGB4Q8WW32 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGB4Q8WW32 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 AL136982.4-201ENST00000437689 1740 ntBASIC16.22■□□□□ 0.19
HMGB4Q8WW32 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 RPS2P32-201ENST00000439199 892 ntBASIC16.22■□□□□ 0.19
HMGB4Q8WW32 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 AC009053.2-201ENST00000563701 2365 ntBASIC16.22■□□□□ 0.19
HMGB4Q8WW32 U82695.1-201ENST00000635752 1889 ntBASIC16.22■□□□□ 0.19
HMGB4Q8WW32 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGB4Q8WW32 CYP4F24P-201ENST00000586049 1580 ntBASIC16.21■□□□□ 0.19
HMGB4Q8WW32 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 TMEM14DP-201ENST00000422205 345 ntBASIC16.21■□□□□ 0.19
HMGB4Q8WW32 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 AC106886.1-201ENST00000568660 600 ntBASIC16.21■□□□□ 0.19
HMGB4Q8WW32 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 WFDC1-204ENST00000613603 549 ntBASIC16.21■□□□□ 0.19
HMGB4Q8WW32 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGB4Q8WW32 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms