Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 AC087386.2-201ENST00000623212 4637 ntBASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.61□□□□□ -0.71
SMIM11BQ8TCY0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 MIR662-201ENST00000384847 95 ntBASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 HLA-L-209ENST00000420110 1011 ntBASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 NUS1P1-201ENST00000446295 882 ntBASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 AL138831.2-201ENST00000606564 490 ntBASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 AC073592.5-201ENST00000624854 528 ntBASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 AC138969.2-201ENST00000532739 9932 ntBASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC10.6□□□□□ -0.71
SMIM11BQ8TCY0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMIM11BQ8TCY0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms