Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 MCCD1P2-201ENST00000423228 335 ntBASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AL135744.1-201ENST00000565098 629 ntBASIC15.22■□□□□ 0.03
NUP43Q8NFH3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.22■□□□□ 0.03
NUP43Q8NFH3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 AC073389.1-201ENST00000595595 795 ntBASIC15.21■□□□□ 0.03
NUP43Q8NFH3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 AC092902.6-201ENST00000641783 218 ntBASIC15.21■□□□□ 0.03
NUP43Q8NFH3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 AC132872.4-202ENST00000622924 2756 ntBASIC15.21■□□□□ 0.03
NUP43Q8NFH3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUP43Q8NFH3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NUP43Q8NFH3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.21■□□□□ 0.02
NUP43Q8NFH3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NUP43Q8NFH3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NUP43Q8NFH3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NUP43Q8NFH3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms