Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 AC092850.2-201ENST00000623821 2697 ntBASIC14.25□□□□□ -0.13
CPEB3Q8NE35 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 FOXO1B-201ENST00000504678 1527 ntBASIC14.25□□□□□ -0.13
CPEB3Q8NE35 AL589702.1-201ENST00000641229 1509 ntBASIC14.25□□□□□ -0.13
CPEB3Q8NE35 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC211486.1-202ENST00000416371 468 ntBASIC14.24□□□□□ -0.13
CPEB3Q8NE35 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AL592309.1-201ENST00000443127 649 ntBASIC14.24□□□□□ -0.13
CPEB3Q8NE35 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC211476.1-201ENST00000503899 468 ntBASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC105233.2-201ENST00000523697 349 ntBASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AF228730.5-201ENST00000530288 346 ntBASIC14.24□□□□□ -0.13
CPEB3Q8NE35 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC022145.2-201ENST00000598203 171 ntBASIC14.24□□□□□ -0.13
CPEB3Q8NE35 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC055717.3-201ENST00000622967 595 ntBASIC14.24□□□□□ -0.13
CPEB3Q8NE35 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.24□□□□□ -0.13
CPEB3Q8NE35 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AC018695.7-201ENST00000624587 2492 ntBASIC14.23□□□□□ -0.13
CPEB3Q8NE35 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms