Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 AC008677.1-201ENST00000519230 1561 ntBASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 GPAA1P2-202ENST00000606848 1787 ntBASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 RNU1-129P-201ENST00000384064 167 ntBASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 AC107890.1-201ENST00000422478 521 ntBASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 BASP1P1-201ENST00000430708 665 ntBASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 U1.21-201ENST00000580816 167 ntBASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 AC239800.4-201ENST00000603712 296 ntBASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC33Q8N5R6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC33Q8N5R6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC33Q8N5R6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC33Q8N5R6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCDC33Q8N5R6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 FO538757.1-201ENST00000623083 1397 ntBASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 SLC25A39P2-201ENST00000537614 270 ntBASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 AL031055.1-201ENST00000606362 631 ntBASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC33Q8N5R6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms