Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 PAUPAR-201ENST00000630360 2965 ntBASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 AL589702.1-201ENST00000641229 1509 ntBASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 YBX2P1-201ENST00000394192 760 ntBASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 RN7SL371P-201ENST00000578099 267 ntBASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC116Q8IYX3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 AC132872.4-202ENST00000622924 2756 ntBASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 AL365203.3-201ENST00000609742 2057 ntBASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC116Q8IYX3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms