Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 AC004945.1-201ENST00000416738 983 ntBASIC17.22■□□□□ 0.35
RNF135Q8IUD6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 AC073389.1-201ENST00000595595 795 ntBASIC17.22■□□□□ 0.35
RNF135Q8IUD6 MIR6787-201ENST00000616675 61 ntBASIC17.22■□□□□ 0.35
RNF135Q8IUD6 MIR6775-201ENST00000617557 69 ntBASIC17.22■□□□□ 0.35
RNF135Q8IUD6 GPR182-203ENST00000622922 591 ntBASIC17.22■□□□□ 0.35
RNF135Q8IUD6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 AC124067.4-201ENST00000519691 2379 ntBASIC17.22■□□□□ 0.35
RNF135Q8IUD6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF135Q8IUD6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 AC005915.1-201ENST00000624912 2018 ntBASIC17.21■□□□□ 0.35
RNF135Q8IUD6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 HLA-H-201ENST00000383620 1096 ntBASIC17.21■□□□□ 0.35
RNF135Q8IUD6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF135Q8IUD6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RNF135Q8IUD6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RNF135Q8IUD6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF135Q8IUD6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 SLC22A20-204ENST00000530038 1673 ntBASIC17.2■□□□□ 0.34
RNF135Q8IUD6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 BCYRN1-201ENST00000418539 200 ntBASIC17.2■□□□□ 0.34
RNF135Q8IUD6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 TMEM261P1-201ENST00000604899 340 ntBASIC17.2■□□□□ 0.34
RNF135Q8IUD6 AC004790.1-201ENST00000612686 536 ntBASIC17.2■□□□□ 0.34
RNF135Q8IUD6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 UBALD1-205ENST00000590891 2641 ntBASIC17.2■□□□□ 0.34
RNF135Q8IUD6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms