Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC097374.2-201ENST00000618617 1306 ntBASIC14.28□□□□□ -0.12
C11orf88Q6PI97 REXO1L6P-202ENST00000619970 1078 ntBASIC14.28□□□□□ -0.12
C11orf88Q6PI97 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.27□□□□□ -0.12
C11orf88Q6PI97 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 AC114341.1-201ENST00000618070 349 ntBASIC14.27□□□□□ -0.13
C11orf88Q6PI97 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.27□□□□□ -0.13
C11orf88Q6PI97 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 ME2P1-201ENST00000426028 1970 ntBASIC14.27□□□□□ -0.13
C11orf88Q6PI97 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C11orf88Q6PI97 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 NUS1P2-201ENST00000417358 873 ntBASIC14.26□□□□□ -0.13
C11orf88Q6PI97 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 AP002469.2-201ENST00000531724 424 ntBASIC14.26□□□□□ -0.13
C11orf88Q6PI97 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf88Q6PI97 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms