Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 SLC25A1P3-201ENST00000395415 828 ntBASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 AC093909.1-201ENST00000504731 1122 ntBASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 AL662844.1-201ENST00000546340 181 ntBASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 AL773604.1-201ENST00000617417 272 ntBASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 AC010327.5-201ENST00000586923 3061 ntBASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM53Q6P2H8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 AL590787.1-201ENST00000568856 1315 ntBASIC15□□□□□ -0.01
TMEM53Q6P2H8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 AP002469.2-201ENST00000531724 424 ntBASIC15□□□□□ -0.01
TMEM53Q6P2H8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM53Q6P2H8 RHBDF1P1-201ENST00000427504 1941 ntBASIC15□□□□□ -0.01
TMEM53Q6P2H8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TMEM53Q6P2H8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms