Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBM48Q5RL73 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBM48Q5RL73 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBM48Q5RL73 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBM48Q5RL73 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.89□□□□□ -0.03
RBM48Q5RL73 AC131009.4-201ENST00000624048 1740 ntBASIC14.89□□□□□ -0.03
RBM48Q5RL73 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RBM48Q5RL73 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBM48Q5RL73 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBM48Q5RL73 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBM48Q5RL73 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.89□□□□□ -0.03
RBM48Q5RL73 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.89□□□□□ -0.03
RBM48Q5RL73 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 AC091167.2-201ENST00000579581 588 ntBASIC14.88□□□□□ -0.03
RBM48Q5RL73 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.88□□□□□ -0.03
RBM48Q5RL73 AL592071.1-201ENST00000611956 408 ntBASIC14.88□□□□□ -0.03
RBM48Q5RL73 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.88□□□□□ -0.03
RBM48Q5RL73 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBM48Q5RL73 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 AL161772.1-201ENST00000610494 4412 ntBASIC14.87□□□□□ -0.03
RBM48Q5RL73 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RBM48Q5RL73 C18orf15-201ENST00000623680 2534 ntBASIC14.87□□□□□ -0.03
RBM48Q5RL73 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBM48Q5RL73 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RBM48Q5RL73 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.86□□□□□ -0.03
RBM48Q5RL73 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms