Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AC003669.1-201ENST00000334569 611 ntBASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 MRPL20P1-201ENST00000400819 433 ntBASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 MIR4745-201ENST00000577608 62 ntBASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AC138761.1-201ENST00000584393 385 ntBASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AC004877.2-201ENST00000623941 599 ntBASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 KLF4P1-201ENST00000412782 1185 ntBASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.31□□□□□ -0.12
CHRFAM7AQ494W8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms