Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 AC144831.1-201ENST00000573312 2656 ntBASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 AC005225.4-201ENST00000557330 545 ntBASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 CYP2A7P1-201ENST00000595391 815 ntBASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 MST1L-201ENST00000442552 2185 ntBASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144BQ3MJ40 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 AC092384.3-202ENST00000564646 2873 ntBASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 KRT8P49-201ENST00000604166 1432 ntBASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 AC241585.1-201ENST00000433527 519 ntBASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 AC068418.2-201ENST00000577309 3703 ntBASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144BQ3MJ40 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 AL021920.2-201ENST00000624828 1351 ntBASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 AC142381.1-201ENST00000426099 345 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms