Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H6P61129 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H6P61129 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H6P61129 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H6P61129 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H6P61129 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H6P61129 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H6P61129 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.45■■□□□ 1.02
ZC3H6P61129 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H6P61129 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H6P61129 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ZC3H6P61129 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
ZC3H6P61129 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
ZC3H6P61129 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H6P61129 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
ZC3H6P61129 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.44■■□□□ 1.02
ZC3H6P61129 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 C1QBPP1-201ENST00000400117 770 ntBASIC21.44■■□□□ 1.02
ZC3H6P61129 AC016694.1-201ENST00000434179 700 ntBASIC21.44■■□□□ 1.02
ZC3H6P61129 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.44■■□□□ 1.02
ZC3H6P61129 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 VDAC1P7-201ENST00000462417 847 ntBASIC21.44■■□□□ 1.02
ZC3H6P61129 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.44■■□□□ 1.02
ZC3H6P61129 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H6P61129 AC120045.2-201ENST00000567334 178 ntBASIC21.44■■□□□ 1.02
ZC3H6P61129 AL049840.4-201ENST00000602422 811 ntBASIC21.44■■□□□ 1.02
ZC3H6P61129 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.44■■□□□ 1.02
ZC3H6P61129 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.44■■□□□ 1.02
ZC3H6P61129 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
ZC3H6P61129 AC139713.2-201ENST00000641328 2723 ntBASIC21.44■■□□□ 1.02
ZC3H6P61129 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H6P61129 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H6P61129 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
ZC3H6P61129 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.43■■□□□ 1.02
ZC3H6P61129 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H6P61129 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.43■■□□□ 1.02
ZC3H6P61129 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.43■■□□□ 1.02
ZC3H6P61129 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
ZC3H6P61129 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.43■■□□□ 1.02
ZC3H6P61129 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.43■■□□□ 1.02
ZC3H6P61129 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.43■■□□□ 1.02
ZC3H6P61129 RN7SL560P-201ENST00000577943 264 ntBASIC21.43■■□□□ 1.02
ZC3H6P61129 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 BNIP3P1-202ENST00000550043 1585 ntBASIC21.43■■□□□ 1.02
ZC3H6P61129 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ZC3H6P61129 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.43■■□□□ 1.02
ZC3H6P61129 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H6P61129 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H6P61129 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ZC3H6P61129 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.42■■□□□ 1.02
ZC3H6P61129 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H6P61129 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ZC3H6P61129 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 TOMM22P5-201ENST00000416399 439 ntBASIC21.42■■□□□ 1.02
ZC3H6P61129 AC012441.1-201ENST00000446669 685 ntBASIC21.42■■□□□ 1.02
ZC3H6P61129 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.42■■□□□ 1.02
ZC3H6P61129 AC093433.1-201ENST00000458048 571 ntBASIC21.42■■□□□ 1.02
ZC3H6P61129 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H6P61129 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.42■■□□□ 1.02
ZC3H6P61129 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21.42■■□□□ 1.02
ZC3H6P61129 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
ZC3H6P61129 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.42■■□□□ 1.02
ZC3H6P61129 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H6P61129 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 AC091271.1-201ENST00000611877 1162 ntBASIC21.42■■□□□ 1.02
ZC3H6P61129 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H6P61129 AC005252.2-201ENST00000624630 1141 ntBASIC21.42■■□□□ 1.02
ZC3H6P61129 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H6P61129 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ZC3H6P61129 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.42■■□□□ 1.02
ZC3H6P61129 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms