Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 AL441883.1-201ENST00000566170 1045 ntBASIC11.49□□□□□ -0.57
CKS1BP61024 AC005332.3-201ENST00000589904 676 ntBASIC11.49□□□□□ -0.57
CKS1BP61024 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.49□□□□□ -0.57
CKS1BP61024 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS1BP61024 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS1BP61024 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS1BP61024 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 MIR662-201ENST00000384847 95 ntBASIC11.48□□□□□ -0.57
CKS1BP61024 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.48□□□□□ -0.57
CKS1BP61024 BX664615.1-201ENST00000443558 458 ntBASIC11.48□□□□□ -0.57
CKS1BP61024 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.48□□□□□ -0.57
CKS1BP61024 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.48□□□□□ -0.57
CKS1BP61024 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
CKS1BP61024 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS1BP61024 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CKS1BP61024 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS1BP61024 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS1BP61024 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS1BP61024 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS1BP61024 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 RNF216P1-203ENST00000404404 2427 ntBASIC11.47□□□□□ -0.57
CKS1BP61024 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CKS1BP61024 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS1BP61024 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS1BP61024 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS1BP61024 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CKS1BP61024 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms