Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC42P60953 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC42P60953 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDC42P60953 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.93□□□□□ -0.02
CDC42P60953 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.93□□□□□ -0.02
CDC42P60953 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CDC42P60953 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDC42P60953 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 AC005622.1-201ENST00000636801 1703 ntBASIC14.92□□□□□ -0.02
CDC42P60953 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42P60953 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDC42P60953 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC42P60953 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC42P60953 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 AC092329.2-201ENST00000598402 547 ntBASIC14.92□□□□□ -0.02
CDC42P60953 AL589182.2-201ENST00000619332 1049 ntBASIC14.92□□□□□ -0.02
CDC42P60953 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42P60953 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDC42P60953 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42P60953 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42P60953 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42P60953 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDC42P60953 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42P60953 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42P60953 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 U82695.1-201ENST00000635752 1889 ntBASIC14.91□□□□□ -0.02
CDC42P60953 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDC42P60953 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CDC42P60953 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 AC104819.1-201ENST00000504587 486 ntBASIC14.91□□□□□ -0.02
CDC42P60953 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 AL109954.1-202ENST00000564051 2148 ntBASIC14.91□□□□□ -0.02
CDC42P60953 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.91□□□□□ -0.02
CDC42P60953 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.91□□□□□ -0.02
CDC42P60953 AL121956.5-201ENST00000625261 221 ntBASIC14.91□□□□□ -0.02
CDC42P60953 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.91□□□□□ -0.02
CDC42P60953 AP005117.1-201ENST00000584346 1413 ntBASIC14.91□□□□□ -0.02
CDC42P60953 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42P60953 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42P60953 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms