Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.42■□□□□ 0.22
WNT3AP56704 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.42■□□□□ 0.22
WNT3AP56704 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
WNT3AP56704 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 HAUS4P1-201ENST00000406739 1145 ntBASIC16.42■□□□□ 0.22
WNT3AP56704 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.42■□□□□ 0.22
WNT3AP56704 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.42■□□□□ 0.22
WNT3AP56704 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.42■□□□□ 0.22
WNT3AP56704 SLC25A39P2-201ENST00000537614 270 ntBASIC16.42■□□□□ 0.22
WNT3AP56704 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 AC084121.4-201ENST00000641598 221 ntBASIC16.42■□□□□ 0.22
WNT3AP56704 AF228730.8-201ENST00000642140 221 ntBASIC16.42■□□□□ 0.22
WNT3AP56704 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 AC112504.1-201ENST00000623415 1841 ntBASIC16.42■□□□□ 0.22
WNT3AP56704 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
WNT3AP56704 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
WNT3AP56704 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.41■□□□□ 0.22
WNT3AP56704 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
WNT3AP56704 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3AP56704 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 AC004461.1-201ENST00000412461 403 ntBASIC16.41■□□□□ 0.22
WNT3AP56704 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3AP56704 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 AC061975.2-201ENST00000581722 295 ntBASIC16.41■□□□□ 0.22
WNT3AP56704 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3AP56704 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 AC008677.1-201ENST00000519230 1561 ntBASIC16.41■□□□□ 0.22
WNT3AP56704 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3AP56704 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3AP56704 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3AP56704 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3AP56704 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3AP56704 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
WNT3AP56704 FAM220BP-201ENST00000377689 816 ntBASIC16.4■□□□□ 0.22
WNT3AP56704 AC005237.2-201ENST00000434368 219 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms