Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITGA8P53708 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ITGA8P53708 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.72■□□□□ 0.27
ITGA8P53708 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITGA8P53708 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITGA8P53708 AC006058.4-201ENST00000624016 1670 ntBASIC16.72■□□□□ 0.27
ITGA8P53708 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITGA8P53708 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
ITGA8P53708 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.71■□□□□ 0.27
ITGA8P53708 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
ITGA8P53708 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.71■□□□□ 0.27
ITGA8P53708 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 FAM185BP-201ENST00000443595 716 ntBASIC16.71■□□□□ 0.27
ITGA8P53708 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.71■□□□□ 0.27
ITGA8P53708 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.71■□□□□ 0.27
ITGA8P53708 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 AC008735.5-201ENST00000623544 497 ntBASIC16.71■□□□□ 0.27
ITGA8P53708 AC004790.2-201ENST00000623588 572 ntBASIC16.71■□□□□ 0.27
ITGA8P53708 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ITGA8P53708 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ITGA8P53708 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ITGA8P53708 AC023157.3-201ENST00000619086 2088 ntBASIC16.71■□□□□ 0.27
ITGA8P53708 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.71■□□□□ 0.27
ITGA8P53708 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITGA8P53708 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
ITGA8P53708 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.71■□□□□ 0.26
ITGA8P53708 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ITGA8P53708 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.7■□□□□ 0.26
ITGA8P53708 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.7■□□□□ 0.26
ITGA8P53708 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 CICP13-201ENST00000422015 2789 ntBASIC16.7■□□□□ 0.26
ITGA8P53708 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
ITGA8P53708 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.7■□□□□ 0.26
ITGA8P53708 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 AP002414.3-201ENST00000589352 1468 ntBASIC16.7■□□□□ 0.26
ITGA8P53708 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.7■□□□□ 0.26
ITGA8P53708 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.7■□□□□ 0.26
ITGA8P53708 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 AC108073.2-201ENST00000464002 357 ntBASIC16.7■□□□□ 0.26
ITGA8P53708 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.7■□□□□ 0.26
ITGA8P53708 AC073648.2-201ENST00000510116 352 ntBASIC16.7■□□□□ 0.26
ITGA8P53708 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.7■□□□□ 0.26
ITGA8P53708 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 LINC01711-201ENST00000598340 967 ntBASIC16.7■□□□□ 0.26
ITGA8P53708 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.7■□□□□ 0.26
ITGA8P53708 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.7■□□□□ 0.26
ITGA8P53708 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.7■□□□□ 0.26
ITGA8P53708 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.7■□□□□ 0.26
ITGA8P53708 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITGA8P53708 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ITGA8P53708 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITGA8P53708 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ITGA8P53708 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.69■□□□□ 0.26
ITGA8P53708 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITGA8P53708 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ITGA8P53708 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.69■□□□□ 0.26
ITGA8P53708 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITGA8P53708 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITGA8P53708 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms