Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SSR4P51571 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.87□□□□□ -0.03
SSR4P51571 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSR4P51571 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSR4P51571 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.87□□□□□ -0.03
SSR4P51571 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 PCDHA12-202ENST00000613593 2588 ntBASIC14.86□□□□□ -0.03
SSR4P51571 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SSR4P51571 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSR4P51571 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR4P51571 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SSR4P51571 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 FAM207CP-201ENST00000443486 507 ntBASIC14.86□□□□□ -0.03
SSR4P51571 UGT1A2P-201ENST00000454886 866 ntBASIC14.86□□□□□ -0.03
SSR4P51571 RN7SL618P-201ENST00000477850 296 ntBASIC14.86□□□□□ -0.03
SSR4P51571 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.86□□□□□ -0.03
SSR4P51571 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.86□□□□□ -0.03
SSR4P51571 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.86□□□□□ -0.03
SSR4P51571 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR4P51571 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR4P51571 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.86□□□□□ -0.03
SSR4P51571 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR4P51571 KRT8P12-202ENST00000472924 1397 ntBASIC14.85□□□□□ -0.03
SSR4P51571 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.85□□□□□ -0.03
SSR4P51571 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 SPDYE17-201ENST00000412399 783 ntBASIC14.85□□□□□ -0.03
SSR4P51571 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 LINC02084-201ENST00000606069 1096 ntBASIC14.85□□□□□ -0.03
SSR4P51571 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR4P51571 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR4P51571 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR4P51571 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms