Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
UBE2AP49459 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
UBE2AP49459 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 WDR53-204ENST00000433160 887 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 FAM197Y8-203ENST00000450145 560 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 PAWRP1-201ENST00000451083 565 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 RNPS1P1-201ENST00000507437 918 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.38□□□□□ -0.75
UBE2AP49459 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.38□□□□□ -0.75
UBE2AP49459 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 AC013467.2-201ENST00000605472 835 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.38□□□□□ -0.75
UBE2AP49459 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 REXO1L1P-201ENST00000379010 6598 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 AC006449.5-201ENST00000610658 2098 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 AL031595.1-201ENST00000623969 4709 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 PC-204ENST00000524491 1714 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 CYP2T1P-202ENST00000641596 2535 ntBASIC10.38□□□□□ -0.75
UBE2AP49459 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2AP49459 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC10.37□□□□□ -0.75
UBE2AP49459 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
UBE2AP49459 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
UBE2AP49459 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 AL353732.1-201ENST00000569618 1459 ntBASIC10.37□□□□□ -0.75
UBE2AP49459 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
UBE2AP49459 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
UBE2AP49459 AL662844.4-201ENST00000606367 2838 ntBASIC10.37□□□□□ -0.75
UBE2AP49459 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
UBE2AP49459 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC10.37□□□□□ -0.75
UBE2AP49459 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2AP49459 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.37□□□□□ -0.75
UBE2AP49459 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2AP49459 AC093909.1-201ENST00000504731 1122 ntBASIC10.37□□□□□ -0.75
UBE2AP49459 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms