Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.19■□□□□ 0.5
TM4SF4P48230 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TM4SF4P48230 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF4P48230 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF4P48230 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF4P48230 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 AL133466.1-201ENST00000447582 150 ntBASIC18.19■□□□□ 0.5
TM4SF4P48230 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.19■□□□□ 0.5
TM4SF4P48230 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
TM4SF4P48230 AC107373.2-201ENST00000607735 490 ntBASIC18.19■□□□□ 0.5
TM4SF4P48230 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF4P48230 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF4P48230 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF4P48230 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF4P48230 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
TM4SF4P48230 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF4P48230 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF4P48230 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF4P48230 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF4P48230 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF4P48230 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 MIR769-201ENST00000390225 118 ntBASIC18.18■□□□□ 0.5
TM4SF4P48230 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 RPL17P11-201ENST00000417593 544 ntBASIC18.18■□□□□ 0.5
TM4SF4P48230 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF4P48230 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF4P48230 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.18■□□□□ 0.5
TM4SF4P48230 HSPB1P2-201ENST00000448722 546 ntBASIC18.18■□□□□ 0.5
TM4SF4P48230 FTLP1-201ENST00000449155 526 ntBASIC18.18■□□□□ 0.5
TM4SF4P48230 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.18■□□□□ 0.5
TM4SF4P48230 COX5BP1-201ENST00000507622 393 ntBASIC18.18■□□□□ 0.5
TM4SF4P48230 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.18■□□□□ 0.5
TM4SF4P48230 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TM4SF4P48230 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.18■□□□□ 0.5
TM4SF4P48230 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
TM4SF4P48230 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.18■□□□□ 0.5
TM4SF4P48230 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF4P48230 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF4P48230 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
TM4SF4P48230 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.17■□□□□ 0.5
TM4SF4P48230 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TM4SF4P48230 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF4P48230 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF4P48230 HNRNPUP1-201ENST00000554987 333 ntBASIC18.17■□□□□ 0.5
TM4SF4P48230 AP001505.2-201ENST00000616815 443 ntBASIC18.17■□□□□ 0.5
TM4SF4P48230 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.17■□□□□ 0.5
TM4SF4P48230 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.17■□□□□ 0.5
TM4SF4P48230 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.17■□□□□ 0.5
TM4SF4P48230 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms