Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 AL596257.1-201ENST00000641463 2694 ntBASIC17.01■□□□□ 0.31
SLC1A1P43005 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SLC1A1P43005 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A1P43005 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.01■□□□□ 0.31
SLC1A1P43005 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC1A1P43005 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 AC018845.2-201ENST00000568326 409 ntBASIC17.01■□□□□ 0.31
SLC1A1P43005 AC068137.2-201ENST00000605408 478 ntBASIC17.01■□□□□ 0.31
SLC1A1P43005 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.01■□□□□ 0.31
SLC1A1P43005 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17■□□□□ 0.31
SLC1A1P43005 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 DKFZP434H168-201ENST00000567381 1905 ntBASIC17■□□□□ 0.31
SLC1A1P43005 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 AC002056.1-201ENST00000395613 760 ntBASIC17■□□□□ 0.31
SLC1A1P43005 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 LBH-204ENST00000406087 559 ntTSL 4 BASIC17■□□□□ 0.31
SLC1A1P43005 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 KRT18P2-201ENST00000447938 1258 ntBASIC17■□□□□ 0.31
SLC1A1P43005 AC074386.1-202ENST00000463561 864 ntBASIC17■□□□□ 0.31
SLC1A1P43005 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 PDPK2P-202ENST00000562415 1191 ntBASIC17■□□□□ 0.31
SLC1A1P43005 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17■□□□□ 0.31
SLC1A1P43005 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A1P43005 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A1P43005 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SLC1A1P43005 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A1P43005 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A1P43005 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A1P43005 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A1P43005 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.99■□□□□ 0.31
SLC1A1P43005 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A1P43005 RPL13AP23-201ENST00000480739 586 ntBASIC16.99■□□□□ 0.31
SLC1A1P43005 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC1A1P43005 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A1P43005 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC1A1P43005 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC1A1P43005 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms