Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASP3P42574 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASP3P42574 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CASP3P42574 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CASP3P42574 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.27■□□□□ 0.03
CASP3P42574 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASP3P42574 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASP3P42574 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CASP3P42574 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CASP3P42574 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 AC078925.2-201ENST00000624013 1973 ntBASIC15.26■□□□□ 0.03
CASP3P42574 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.26■□□□□ 0.03
CASP3P42574 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.26■□□□□ 0.03
CASP3P42574 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.26■□□□□ 0.03
CASP3P42574 FAM86C2P-203ENST00000528684 1004 ntBASIC15.26■□□□□ 0.03
CASP3P42574 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
CASP3P42574 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.26■□□□□ 0.03
CASP3P42574 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CASP3P42574 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CASP3P42574 AC079781.4-201ENST00000641908 219 ntBASIC15.26■□□□□ 0.03
CASP3P42574 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CASP3P42574 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CASP3P42574 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP3P42574 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP3P42574 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CASP3P42574 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.25■□□□□ 0.03
CASP3P42574 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
CASP3P42574 ADH5P3-201ENST00000433842 1137 ntBASIC15.25■□□□□ 0.03
CASP3P42574 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP3P42574 AP006288.1-201ENST00000446065 395 ntBASIC15.25■□□□□ 0.03
CASP3P42574 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.25■□□□□ 0.03
CASP3P42574 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP3P42574 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CASP3P42574 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CASP3P42574 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP3P42574 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 RARRES2P8-201ENST00000566335 367 ntBASIC15.25■□□□□ 0.03
CASP3P42574 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP3P42574 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP3P42574 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP3P42574 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.25■□□□□ 0.03
CASP3P42574 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms