Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
THBS4P35443 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.35□□□□□ -0.11
THBS4P35443 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
THBS4P35443 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.35□□□□□ -0.11
THBS4P35443 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.34□□□□□ -0.11
THBS4P35443 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.34□□□□□ -0.11
THBS4P35443 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.34□□□□□ -0.11
THBS4P35443 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.34□□□□□ -0.11
THBS4P35443 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
THBS4P35443 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
THBS4P35443 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 AKAP8P1-201ENST00000434743 1349 ntBASIC14.34□□□□□ -0.11
THBS4P35443 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
THBS4P35443 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
THBS4P35443 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
THBS4P35443 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
THBS4P35443 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
THBS4P35443 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
THBS4P35443 WASH6P-202ENST00000359512 1437 ntBASIC14.33□□□□□ -0.11
THBS4P35443 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.33□□□□□ -0.11
THBS4P35443 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
THBS4P35443 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
THBS4P35443 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
THBS4P35443 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
THBS4P35443 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THBS4P35443 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.33□□□□□ -0.12
THBS4P35443 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.33□□□□□ -0.12
THBS4P35443 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.33□□□□□ -0.12
THBS4P35443 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THBS4P35443 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THBS4P35443 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.33□□□□□ -0.12
THBS4P35443 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
THBS4P35443 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.33□□□□□ -0.12
THBS4P35443 RN7SL589P-201ENST00000481268 310 ntBASIC14.33□□□□□ -0.12
THBS4P35443 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 AC243562.1-201ENST00000560672 389 ntBASIC14.33□□□□□ -0.12
THBS4P35443 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.33□□□□□ -0.12
THBS4P35443 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.33□□□□□ -0.12
THBS4P35443 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.33□□□□□ -0.12
THBS4P35443 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.33□□□□□ -0.12
THBS4P35443 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.33□□□□□ -0.12
THBS4P35443 AC021097.1-201ENST00000607902 574 ntBASIC14.33□□□□□ -0.12
THBS4P35443 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
THBS4P35443 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms