Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 HMGA1P7-201ENST00000406908 502 ntBASIC17.22■□□□□ 0.35
CTNNA1P35221 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNNA1P35221 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNNA1P35221 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNNA1P35221 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNNA1P35221 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CTNNA1P35221 AC117500.6-201ENST00000624871 588 ntBASIC17.22■□□□□ 0.35
CTNNA1P35221 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNNA1P35221 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CTNNA1P35221 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CTNNA1P35221 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CTNNA1P35221 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTNNA1P35221 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.21■□□□□ 0.35
CTNNA1P35221 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.21■□□□□ 0.35
CTNNA1P35221 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 RPS2P28-201ENST00000314255 741 ntBASIC17.21■□□□□ 0.35
CTNNA1P35221 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.21■□□□□ 0.35
CTNNA1P35221 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CTNNA1P35221 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 PRSS29P-201ENST00000440800 595 ntBASIC17.21■□□□□ 0.35
CTNNA1P35221 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 CXCL1P1-201ENST00000502804 216 ntBASIC17.21■□□□□ 0.35
CTNNA1P35221 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.21■□□□□ 0.35
CTNNA1P35221 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CTNNA1P35221 AL031055.1-201ENST00000606362 631 ntBASIC17.21■□□□□ 0.35
CTNNA1P35221 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTNNA1P35221 AC148477.8-201ENST00000624298 468 ntBASIC17.21■□□□□ 0.35
CTNNA1P35221 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.21■□□□□ 0.35
CTNNA1P35221 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNNA1P35221 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 LINC02228-204ENST00000642115 2962 ntBASIC17.21■□□□□ 0.35
CTNNA1P35221 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CTNNA1P35221 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CTNNA1P35221 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CTNNA1P35221 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTNNA1P35221 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CTNNA1P35221 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CTNNA1P35221 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.21■□□□□ 0.34
CTNNA1P35221 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.21■□□□□ 0.34
CTNNA1P35221 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.21■□□□□ 0.34
CTNNA1P35221 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTNNA1P35221 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.2■□□□□ 0.34
CTNNA1P35221 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNNA1P35221 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.2■□□□□ 0.34
CTNNA1P35221 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNNA1P35221 AC013268.4-201ENST00000637413 2228 ntBASIC17.2■□□□□ 0.34
CTNNA1P35221 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNNA1P35221 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CTNNA1P35221 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNNA1P35221 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTNNA1P35221 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CTNNA1P35221 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CTNNA1P35221 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNNA1P35221 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.2■□□□□ 0.34
CTNNA1P35221 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.2■□□□□ 0.34
CTNNA1P35221 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms