Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
PTPN6P29350 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 AL513190.1-201ENST00000621254 727 ntBASIC15.44■□□□□ 0.06
PTPN6P29350 AC004877.2-201ENST00000623941 599 ntBASIC15.44■□□□□ 0.06
PTPN6P29350 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN6P29350 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN6P29350 AC007064.4-201ENST00000637740 555 ntBASIC15.44■□□□□ 0.06
PTPN6P29350 AC092865.6-201ENST00000642101 219 ntBASIC15.44■□□□□ 0.06
PTPN6P29350 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN6P29350 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.43■□□□□ 0.06
PTPN6P29350 BCAR1-209ENST00000546196 1340 ntBASIC15.43■□□□□ 0.06
PTPN6P29350 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PTPN6P29350 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 PPT1-215ENST00000641471 2368 ntBASIC15.43■□□□□ 0.06
PTPN6P29350 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PTPN6P29350 PMS2P4-201ENST00000412466 1052 ntBASIC15.43■□□□□ 0.06
PTPN6P29350 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PTPN6P29350 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 KRT19P2-202ENST00000557173 1012 ntBASIC15.43■□□□□ 0.06
PTPN6P29350 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.43■□□□□ 0.06
PTPN6P29350 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.43■□□□□ 0.06
PTPN6P29350 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.43■□□□□ 0.06
PTPN6P29350 AC023141.13-201ENST00000604991 943 ntBASIC15.43■□□□□ 0.06
PTPN6P29350 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.43■□□□□ 0.06
PTPN6P29350 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.43■□□□□ 0.06
PTPN6P29350 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
PTPN6P29350 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PTPN6P29350 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PTPN6P29350 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN6P29350 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN6P29350 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PTPN6P29350 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
PTPN6P29350 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN6P29350 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTPN6P29350 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
PTPN6P29350 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 MCCD1P2-201ENST00000423228 335 ntBASIC15.42■□□□□ 0.06
PTPN6P29350 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 AC093724.1-201ENST00000448659 1027 ntBASIC15.42■□□□□ 0.06
PTPN6P29350 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN6P29350 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN6P29350 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN6P29350 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN6P29350 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN6P29350 AL645728.2-201ENST00000641974 660 ntBASIC15.42■□□□□ 0.06
PTPN6P29350 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PTPN6P29350 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms