Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 AC046158.3-201ENST00000624947 2558 ntBASIC17.06■□□□□ 0.32
MMP8P22894 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.06■□□□□ 0.32
MMP8P22894 AC134407.2-201ENST00000625089 1978 ntBASIC17.06■□□□□ 0.32
MMP8P22894 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MMP8P22894 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
MMP8P22894 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP8P22894 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP8P22894 UPF3AP3-201ENST00000420996 769 ntBASIC17.05■□□□□ 0.32
MMP8P22894 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.05■□□□□ 0.32
MMP8P22894 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.05■□□□□ 0.32
MMP8P22894 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 AC055717.3-201ENST00000622967 595 ntBASIC17.05■□□□□ 0.32
MMP8P22894 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MMP8P22894 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
MMP8P22894 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP8P22894 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 AL691432.1-201ENST00000596308 1422 ntBASIC17.04■□□□□ 0.32
MMP8P22894 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MMP8P22894 AP3S2-216ENST00000617003 1561 ntBASIC17.04■□□□□ 0.32
MMP8P22894 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 AC004461.1-201ENST00000412461 403 ntBASIC17.04■□□□□ 0.32
MMP8P22894 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP8P22894 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP8P22894 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.04■□□□□ 0.32
MMP8P22894 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 AC093520.2-201ENST00000561830 333 ntBASIC17.04■□□□□ 0.32
MMP8P22894 MIR3687-2-201ENST00000577708 61 ntBASIC17.04■□□□□ 0.32
MMP8P22894 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP8P22894 MIR3687-1-201ENST00000614492 61 ntBASIC17.04■□□□□ 0.32
MMP8P22894 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP8P22894 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MMP8P22894 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MMP8P22894 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms