Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL1P22362 AC099522.2-201ENST00000607001 744 ntBASIC13.97□□□□□ -0.17
CCL1P22362 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL1P22362 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCL1P22362 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CCL1P22362 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCL1P22362 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL1P22362 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCL1P22362 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.96□□□□□ -0.17
CCL1P22362 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.96□□□□□ -0.17
CCL1P22362 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL1P22362 AC112191.1-201ENST00000523689 701 ntBASIC13.96□□□□□ -0.17
CCL1P22362 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.96□□□□□ -0.17
CCL1P22362 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL1P22362 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.96□□□□□ -0.17
CCL1P22362 RARRES2P8-201ENST00000566335 367 ntBASIC13.96□□□□□ -0.17
CCL1P22362 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CCL1P22362 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.96□□□□□ -0.17
CCL1P22362 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL1P22362 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL1P22362 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL1P22362 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
CCL1P22362 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.96□□□□□ -0.17
CCL1P22362 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.96□□□□□ -0.18
CCL1P22362 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCL1P22362 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.96□□□□□ -0.18
CCL1P22362 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CCL1P22362 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCL1P22362 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 AC134407.2-201ENST00000625089 1978 ntBASIC13.95□□□□□ -0.18
CCL1P22362 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CCL1P22362 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 AC007967.2-201ENST00000432613 625 ntBASIC13.95□□□□□ -0.18
CCL1P22362 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 AC105233.2-201ENST00000523697 349 ntBASIC13.95□□□□□ -0.18
CCL1P22362 AF228730.5-201ENST00000530288 346 ntBASIC13.95□□□□□ -0.18
CCL1P22362 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 AC061975.2-201ENST00000581722 295 ntBASIC13.95□□□□□ -0.18
CCL1P22362 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL1P22362 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.95□□□□□ -0.18
CCL1P22362 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms