Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.42■□□□□ 0.06
NCK1P16333 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NCK1P16333 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.42■□□□□ 0.06
NCK1P16333 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.42■□□□□ 0.06
NCK1P16333 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NCK1P16333 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NCK1P16333 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NCK1P16333 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NCK1P16333 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
NCK1P16333 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCK1P16333 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.41■□□□□ 0.06
NCK1P16333 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 AL109954.1-202ENST00000564051 2148 ntBASIC15.41■□□□□ 0.06
NCK1P16333 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 AC138035.3-201ENST00000622706 2791 ntBASIC15.41■□□□□ 0.06
NCK1P16333 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NCK1P16333 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.41■□□□□ 0.06
NCK1P16333 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.41■□□□□ 0.06
NCK1P16333 KRT16P4-201ENST00000453883 522 ntBASIC15.41■□□□□ 0.06
NCK1P16333 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.41■□□□□ 0.06
NCK1P16333 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.41■□□□□ 0.06
NCK1P16333 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 AL732292.2-201ENST00000609649 430 ntBASIC15.41■□□□□ 0.06
NCK1P16333 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NCK1P16333 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 AC068587.6-202ENST00000641839 5619 ntBASIC15.41■□□□□ 0.06
NCK1P16333 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.41■□□□□ 0.06
NCK1P16333 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCK1P16333 AC006504.4-201ENST00000592118 1568 ntBASIC15.41■□□□□ 0.06
NCK1P16333 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NCK1P16333 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
NCK1P16333 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 AC126755.1-201ENST00000525846 6405 ntBASIC15.4■□□□□ 0.06
NCK1P16333 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.4■□□□□ 0.06
NCK1P16333 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.4■□□□□ 0.06
NCK1P16333 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 ELK2BP-201ENST00000415014 1224 ntBASIC15.4■□□□□ 0.06
NCK1P16333 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NCK1P16333 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.4■□□□□ 0.06
NCK1P16333 MTDHP3-201ENST00000594186 672 ntBASIC15.4■□□□□ 0.06
NCK1P16333 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCK1P16333 AC069148.1-201ENST00000608741 768 ntBASIC15.4■□□□□ 0.06
NCK1P16333 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.4■□□□□ 0.06
NCK1P16333 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms