Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.09■□□□□ 0.33
RARAP10276 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RARAP10276 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.08■□□□□ 0.33
RARAP10276 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RARAP10276 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RARAP10276 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.08■□□□□ 0.32
RARAP10276 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.08■□□□□ 0.32
RARAP10276 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.08■□□□□ 0.32
RARAP10276 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.08■□□□□ 0.32
RARAP10276 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 AC093724.1-201ENST00000448659 1027 ntBASIC17.08■□□□□ 0.32
RARAP10276 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RARAP10276 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.08■□□□□ 0.32
RARAP10276 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.08■□□□□ 0.32
RARAP10276 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.08■□□□□ 0.32
RARAP10276 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.08■□□□□ 0.32
RARAP10276 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.08■□□□□ 0.32
RARAP10276 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RARAP10276 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
RARAP10276 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RARAP10276 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.08■□□□□ 0.32
RARAP10276 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.08■□□□□ 0.32
RARAP10276 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RARAP10276 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RARAP10276 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 U82695.1-201ENST00000635752 1889 ntBASIC17.07■□□□□ 0.32
RARAP10276 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
RARAP10276 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.07■□□□□ 0.32
RARAP10276 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RARAP10276 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.07■□□□□ 0.32
RARAP10276 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RARAP10276 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.07■□□□□ 0.32
RARAP10276 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.07■□□□□ 0.32
RARAP10276 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RARAP10276 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.07■□□□□ 0.32
RARAP10276 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RARAP10276 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RARAP10276 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.06■□□□□ 0.32
RARAP10276 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RARAP10276 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms