Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 AZGP1P1-201ENST00000411909 902 ntBASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 MIR6869-201ENST00000619434 62 ntBASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSB-PGBD3P0DP91 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 AL133373.2-201ENST00000623187 2828 ntBASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 FAM86LP-201ENST00000478302 853 ntBASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.34■■□□□ 1.01
CSB-PGBD3P0DP91 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 RPL13P2-201ENST00000440687 659 ntBASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CSB-PGBD3P0DP91 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1
CSB-PGBD3P0DP91 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.33■■□□□ 1
CSB-PGBD3P0DP91 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CSB-PGBD3P0DP91 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CSB-PGBD3P0DP91 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.33■■□□□ 1
CSB-PGBD3P0DP91 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.33■■□□□ 1
CSB-PGBD3P0DP91 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms