Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MMP2P08253 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP2P08253 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.3■□□□□ 0.2
MMP2P08253 AC105021.1-202ENST00000570572 669 ntBASIC16.3■□□□□ 0.2
MMP2P08253 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MMP2P08253 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP2P08253 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP2P08253 AC008741.2-201ENST00000612792 3115 ntBASIC16.3■□□□□ 0.2
MMP2P08253 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MMP2P08253 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP2P08253 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP2P08253 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MMP2P08253 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP2P08253 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.29■□□□□ 0.2
MMP2P08253 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP2P08253 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP2P08253 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP2P08253 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP2P08253 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP2P08253 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.29■□□□□ 0.2
MMP2P08253 AC069262.1-201ENST00000539058 672 ntBASIC16.29■□□□□ 0.2
MMP2P08253 AL133215.2-201ENST00000609242 977 ntBASIC16.29■□□□□ 0.2
MMP2P08253 AC003101.2-201ENST00000612557 442 ntBASIC16.29■□□□□ 0.2
MMP2P08253 AC007967.4-201ENST00000614700 386 ntBASIC16.29■□□□□ 0.2
MMP2P08253 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP2P08253 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP2P08253 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP2P08253 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 CYP4F24P-201ENST00000586049 1580 ntBASIC16.29■□□□□ 0.2
MMP2P08253 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP2P08253 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP2P08253 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP2P08253 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MMP2P08253 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MMP2P08253 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP2P08253 AC011477.6-201ENST00000604980 1927 ntBASIC16.28■□□□□ 0.2
MMP2P08253 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MMP2P08253 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP2P08253 AL139010.1-201ENST00000454878 894 ntBASIC16.28■□□□□ 0.2
MMP2P08253 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP2P08253 AC243562.2-201ENST00000561247 970 ntBASIC16.28■□□□□ 0.2
MMP2P08253 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.28■□□□□ 0.2
MMP2P08253 MIR6080-201ENST00000617359 66 ntBASIC16.28■□□□□ 0.2
MMP2P08253 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP2P08253 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP2P08253 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP2P08253 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms