Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RETP07949 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RETP07949 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RETP07949 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RETP07949 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
RETP07949 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.36■□□□□ 0.21
RETP07949 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RETP07949 AC007389.4-201ENST00000454674 793 ntBASIC16.36■□□□□ 0.21
RETP07949 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.36■□□□□ 0.21
RETP07949 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.36■□□□□ 0.21
RETP07949 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.36■□□□□ 0.21
RETP07949 MIR6775-201ENST00000617557 69 ntBASIC16.36■□□□□ 0.21
RETP07949 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RETP07949 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.36■□□□□ 0.21
RETP07949 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.36■□□□□ 0.21
RETP07949 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RETP07949 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RETP07949 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.35■□□□□ 0.21
RETP07949 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.35■□□□□ 0.21
RETP07949 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 AC092053.1-201ENST00000605787 1936 ntBASIC16.35■□□□□ 0.21
RETP07949 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.35■□□□□ 0.21
RETP07949 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.35■□□□□ 0.21
RETP07949 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RETP07949 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.35■□□□□ 0.21
RETP07949 LINC00895-201ENST00000629028 1637 ntBASIC16.35■□□□□ 0.21
RETP07949 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.35■□□□□ 0.21
RETP07949 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.35■□□□□ 0.21
RETP07949 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 AC124947.2-201ENST00000547118 1133 ntBASIC16.35■□□□□ 0.21
RETP07949 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 MIR4538-201ENST00000581377 78 ntBASIC16.35■□□□□ 0.21
RETP07949 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RETP07949 MIR6787-201ENST00000616675 61 ntBASIC16.35■□□□□ 0.21
RETP07949 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RETP07949 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.35■□□□□ 0.21
RETP07949 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RETP07949 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.35■□□□□ 0.21
RETP07949 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.35■□□□□ 0.21
RETP07949 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.35■□□□□ 0.21
RETP07949 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RETP07949 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RETP07949 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RETP07949 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RETP07949 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
RETP07949 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 PCDH8P1-201ENST00000428983 2773 ntBASIC16.34■□□□□ 0.21
RETP07949 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.34■□□□□ 0.21
RETP07949 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms