Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.7□□□□□ -0.22
CD74P04233 AL160237.2-201ENST00000556165 472 ntBASIC13.7□□□□□ -0.22
CD74P04233 TPSP2-201ENST00000561760 610 ntBASIC13.7□□□□□ -0.22
CD74P04233 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.7□□□□□ -0.22
CD74P04233 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.7□□□□□ -0.22
CD74P04233 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.7□□□□□ -0.22
CD74P04233 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CD74P04233 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD74P04233 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.7□□□□□ -0.22
CD74P04233 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.7□□□□□ -0.22
CD74P04233 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 GRK6P1-201ENST00000400595 1711 ntBASIC13.7□□□□□ -0.22
CD74P04233 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD74P04233 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.7□□□□□ -0.22
CD74P04233 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 NORAD-201ENST00000565493 5339 ntBASIC13.69□□□□□ -0.22
CD74P04233 AL359258.3-201ENST00000622910 2331 ntBASIC13.69□□□□□ -0.22
CD74P04233 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 AC013726.1-201ENST00000563747 2285 ntBASIC13.69□□□□□ -0.22
CD74P04233 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.69□□□□□ -0.22
CD74P04233 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CD74P04233 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.69□□□□□ -0.22
CD74P04233 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.69□□□□□ -0.22
CD74P04233 FAM210CP-201ENST00000445714 574 ntBASIC13.69□□□□□ -0.22
CD74P04233 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.69□□□□□ -0.22
CD74P04233 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.69□□□□□ -0.22
CD74P04233 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.69□□□□□ -0.22
CD74P04233 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CD74P04233 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.69□□□□□ -0.22
CD74P04233 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 AP005117.1-201ENST00000584346 1413 ntBASIC13.69□□□□□ -0.22
CD74P04233 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.69□□□□□ -0.22
CD74P04233 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.69□□□□□ -0.22
CD74P04233 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.69□□□□□ -0.22
CD74P04233 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD74P04233 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.69□□□□□ -0.22
CD74P04233 AC063926.3-201ENST00000624734 5658 ntBASIC13.68□□□□□ -0.22
CD74P04233 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 AL390755.1-201ENST00000623716 2027 ntBASIC13.68□□□□□ -0.22
CD74P04233 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.68□□□□□ -0.22
CD74P04233 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.68□□□□□ -0.22
CD74P04233 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CD74P04233 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.68□□□□□ -0.22
CD74P04233 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms