Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DRAP01903 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DRAP01903 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DRAP01903 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 CDC14C-201ENST00000428251 1719 ntBASIC17.45■□□□□ 0.38
HLA-DRAP01903 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 AC069224.1-201ENST00000566372 1715 ntBASIC17.45■□□□□ 0.38
HLA-DRAP01903 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 AL139400.1-201ENST00000366220 510 ntBASIC17.45■□□□□ 0.38
HLA-DRAP01903 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DRAP01903 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRAP01903 AC008677.1-201ENST00000519230 1561 ntBASIC17.45■□□□□ 0.38
HLA-DRAP01903 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 AC010491.1-201ENST00000563101 2797 ntBASIC17.44■□□□□ 0.38
HLA-DRAP01903 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 AC109322.1-201ENST00000524499 1264 ntBASIC17.44■□□□□ 0.38
HLA-DRAP01903 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 AP001059.3-201ENST00000619053 235 ntBASIC17.44■□□□□ 0.38
HLA-DRAP01903 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DRAP01903 LINC02447-202ENST00000501888 2146 ntBASIC17.44■□□□□ 0.38
HLA-DRAP01903 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRAP01903 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 TSEN15P1-201ENST00000423257 515 ntBASIC17.43■□□□□ 0.38
HLA-DRAP01903 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRAP01903 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DRAP01903 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms