Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
IFNA1P01562 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 AC104581.4-201ENST00000623126 3052 ntBASIC12.92□□□□□ -0.34
IFNA1P01562 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
IFNA1P01562 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 CICP4-201ENST00000447359 2812 ntBASIC12.91□□□□□ -0.34
IFNA1P01562 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 AP002414.1-201ENST00000391405 1147 ntBASIC12.91□□□□□ -0.34
IFNA1P01562 FAM8A6P-201ENST00000407496 1135 ntBASIC12.91□□□□□ -0.34
IFNA1P01562 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.91□□□□□ -0.34
IFNA1P01562 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.91□□□□□ -0.34
IFNA1P01562 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.91□□□□□ -0.34
IFNA1P01562 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 GPR32P1-201ENST00000601788 811 ntBASIC12.91□□□□□ -0.34
IFNA1P01562 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IFNA1P01562 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
IFNA1P01562 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
IFNA1P01562 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
IFNA1P01562 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.9□□□□□ -0.34
IFNA1P01562 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.9□□□□□ -0.34
IFNA1P01562 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
IFNA1P01562 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 ACTG1P4-201ENST00000425123 1122 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.9□□□□□ -0.34
IFNA1P01562 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.9□□□□□ -0.34
IFNA1P01562 AC128676.1-201ENST00000454392 318 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.9□□□□□ -0.34
IFNA1P01562 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.9□□□□□ -0.34
IFNA1P01562 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 AC026471.5-201ENST00000615068 467 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms