Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TOMM40O96008 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TOMM40O96008 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TOMM40O96008 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TOMM40O96008 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.79□□□□□ -0.36
TOMM40O96008 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 AC138035.3-201ENST00000622706 2791 ntBASIC12.79□□□□□ -0.36
TOMM40O96008 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 MIR648-201ENST00000385046 94 ntBASIC12.79□□□□□ -0.36
TOMM40O96008 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
TOMM40O96008 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.79□□□□□ -0.36
TOMM40O96008 FAM197Y8-203ENST00000450145 560 ntBASIC12.79□□□□□ -0.36
TOMM40O96008 AC018712.1-201ENST00000455767 687 ntBASIC12.79□□□□□ -0.36
TOMM40O96008 AC108073.2-201ENST00000464002 357 ntBASIC12.79□□□□□ -0.36
TOMM40O96008 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.79□□□□□ -0.36
TOMM40O96008 AC021097.1-201ENST00000607902 574 ntBASIC12.79□□□□□ -0.36
TOMM40O96008 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TOMM40O96008 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.79□□□□□ -0.36
TOMM40O96008 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
TOMM40O96008 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TOMM40O96008 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.79□□□□□ -0.36
TOMM40O96008 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.78□□□□□ -0.36
TOMM40O96008 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.78□□□□□ -0.36
TOMM40O96008 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.78□□□□□ -0.36
TOMM40O96008 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TOMM40O96008 KRT18P67-201ENST00000432816 1264 ntBASIC12.78□□□□□ -0.36
TOMM40O96008 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.78□□□□□ -0.36
TOMM40O96008 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.78□□□□□ -0.36
TOMM40O96008 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.78□□□□□ -0.36
TOMM40O96008 AL160237.2-201ENST00000556165 472 ntBASIC12.78□□□□□ -0.36
TOMM40O96008 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.78□□□□□ -0.36
TOMM40O96008 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.78□□□□□ -0.36
TOMM40O96008 AL121912.1-201ENST00000603683 238 ntBASIC12.78□□□□□ -0.36
TOMM40O96008 AC004790.2-201ENST00000623588 572 ntBASIC12.78□□□□□ -0.36
TOMM40O96008 TP73-AS1-207ENST00000624167 988 ntBASIC12.78□□□□□ -0.36
TOMM40O96008 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TOMM40O96008 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TOMM40O96008 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
TOMM40O96008 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.78□□□□□ -0.36
TOMM40O96008 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TOMM40O96008 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.78□□□□□ -0.36
TOMM40O96008 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms