Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
LGI1O95970 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.05■□□□□ -0
LGI1O95970 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LGI1O95970 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 AC104109.2-201ENST00000602919 1418 ntBASIC15.05■□□□□ -0
LGI1O95970 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.05■□□□□ -0
LGI1O95970 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.05■□□□□ -0
LGI1O95970 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.05■□□□□ -0
LGI1O95970 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.05■□□□□ -0
LGI1O95970 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 PRAL-201ENST00000624952 3286 ntBASIC15.05■□□□□ -0
LGI1O95970 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
LGI1O95970 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LGI1O95970 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.04■□□□□ -0
LGI1O95970 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.04■□□□□ -0
LGI1O95970 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.04■□□□□ -0
LGI1O95970 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.04■□□□□ -0
LGI1O95970 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.04■□□□□ -0
LGI1O95970 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LGI1O95970 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.04■□□□□ -0
LGI1O95970 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.04■□□□□ -0
LGI1O95970 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.04■□□□□ -0
LGI1O95970 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.04■□□□□ -0
LGI1O95970 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.04■□□□□ -0
LGI1O95970 KRT18P34-201ENST00000488218 1270 ntBASIC15.04■□□□□ -0
LGI1O95970 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.04■□□□□ -0
LGI1O95970 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.04■□□□□ -0
LGI1O95970 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 AC010507.1-201ENST00000633895 436 ntBASIC15.04■□□□□ -0
LGI1O95970 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 AC144831.1-201ENST00000573312 2656 ntBASIC15.04■□□□□ -0
LGI1O95970 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
LGI1O95970 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LGI1O95970 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
LGI1O95970 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LGI1O95970 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.03■□□□□ -0
LGI1O95970 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.03■□□□□ -0
LGI1O95970 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LGI1O95970 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.03■□□□□ -0
LGI1O95970 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.03■□□□□ -0
LGI1O95970 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.03■□□□□ -0
LGI1O95970 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.03■□□□□ -0
LGI1O95970 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LGI1O95970 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.03■□□□□ -0
LGI1O95970 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.03■□□□□ -0
LGI1O95970 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.03■□□□□ -0
LGI1O95970 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.03■□□□□ -0
LGI1O95970 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.03■□□□□ -0
LGI1O95970 Z83851.2-201ENST00000609564 659 ntBASIC15.03■□□□□ -0
LGI1O95970 AL078644.1-201ENST00000609881 752 ntBASIC15.03■□□□□ -0
LGI1O95970 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.03■□□□□ -0
LGI1O95970 AC007064.4-201ENST00000637740 555 ntBASIC15.03■□□□□ -0
LGI1O95970 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms