Protein–RNA interactions for Protein: O75436

VPS26A, Vacuolar protein sorting-associated protein 26A, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26AO75436 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VPS26AO75436 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS26AO75436 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
VPS26AO75436 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
VPS26AO75436 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VPS26AO75436 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS26AO75436 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
VPS26AO75436 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
VPS26AO75436 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 AC007950.2-201ENST00000615045 2347 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.13■□□□□ 0.17
VPS26AO75436 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
VPS26AO75436 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 AC023274.1-201ENST00000418278 595 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 BX842568.4-201ENST00000421222 227 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 AC004832.2-201ENST00000426397 482 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.13■□□□□ 0.17
VPS26AO75436 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS26AO75436 AC099522.2-201ENST00000607001 744 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS26AO75436 LINC02447-202ENST00000501888 2146 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 CDC14C-201ENST00000428251 1719 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS26AO75436 AC068587.6-202ENST00000641839 5619 ntBASIC16.13■□□□□ 0.17
VPS26AO75436 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS26AO75436 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS26AO75436 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS26AO75436 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 AC010491.1-201ENST00000563101 2797 ntBASIC16.12■□□□□ 0.17
VPS26AO75436 AL162727.3-201ENST00000635661 2787 ntBASIC16.12■□□□□ 0.17
VPS26AO75436 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS26AO75436 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VPS26AO75436 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS26AO75436 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS26AO75436 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS26AO75436 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS26AO75436 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
VPS26AO75436 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VPS26AO75436 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS26AO75436 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS26AO75436 MTDHP5-201ENST00000598980 586 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms