Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC069224.1-201ENST00000566372 1715 ntBASIC20.72■□□□□ 0.91
CHL1O00533 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHL1O00533 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHL1O00533 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHL1O00533 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHL1O00533 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 AC011477.6-201ENST00000604980 1927 ntBASIC20.71■□□□□ 0.91
CHL1O00533 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHL1O00533 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.71■□□□□ 0.91
CHL1O00533 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.71■□□□□ 0.91
CHL1O00533 PHKG1P2-201ENST00000457537 863 ntBASIC20.71■□□□□ 0.91
CHL1O00533 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.71■□□□□ 0.91
CHL1O00533 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.71■□□□□ 0.91
CHL1O00533 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.71■□□□□ 0.91
CHL1O00533 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.71■□□□□ 0.91
CHL1O00533 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 SRD5A3P1-201ENST00000603021 949 ntBASIC20.71■□□□□ 0.91
CHL1O00533 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHL1O00533 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHL1O00533 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.71■□□□□ 0.91
CHL1O00533 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHL1O00533 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHL1O00533 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHL1O00533 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHL1O00533 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.7■□□□□ 0.9
CHL1O00533 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHL1O00533 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHL1O00533 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHL1O00533 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHL1O00533 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 GNAQP1-201ENST00000444815 1067 ntBASIC20.7■□□□□ 0.9
CHL1O00533 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.7■□□□□ 0.9
CHL1O00533 AL589987.1-201ENST00000453380 819 ntBASIC20.7■□□□□ 0.9
CHL1O00533 AC104794.3-201ENST00000566840 1248 ntBASIC20.7■□□□□ 0.9
CHL1O00533 AC092337.1-201ENST00000568699 1129 ntBASIC20.7■□□□□ 0.9
CHL1O00533 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.7■□□□□ 0.9
CHL1O00533 AC097359.3-201ENST00000603982 1210 ntBASIC20.7■□□□□ 0.9
CHL1O00533 AC074044.1-201ENST00000609673 707 ntBASIC20.7■□□□□ 0.9
CHL1O00533 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.7■□□□□ 0.9
CHL1O00533 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.7■□□□□ 0.9
CHL1O00533 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHL1O00533 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.7■□□□□ 0.9
CHL1O00533 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHL1O00533 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHL1O00533 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.7■□□□□ 0.9
CHL1O00533 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHL1O00533 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHL1O00533 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.69■□□□□ 0.9
CHL1O00533 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.69■□□□□ 0.9
CHL1O00533 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.69■□□□□ 0.9
CHL1O00533 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
CHL1O00533 TARDBPP1-201ENST00000442013 1203 ntBASIC20.69■□□□□ 0.9
CHL1O00533 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.69■□□□□ 0.9
CHL1O00533 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.69■□□□□ 0.9
CHL1O00533 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
CHL1O00533 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms