Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A1O00337 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC28A1O00337 AC245100.5-201ENST00000452108 331 ntBASIC15.68■□□□□ 0.1
SLC28A1O00337 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC28A1O00337 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC28A1O00337 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC28A1O00337 IGHV3-22-201ENST00000520721 359 ntBASIC15.68■□□□□ 0.1
SLC28A1O00337 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC28A1O00337 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SLC28A1O00337 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A1O00337 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A1O00337 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC28A1O00337 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A1O00337 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A1O00337 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A1O00337 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
SLC28A1O00337 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 AC067930.6-201ENST00000623257 4947 ntBASIC15.67■□□□□ 0.1
SLC28A1O00337 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC28A1O00337 AC079776.4-201ENST00000511039 504 ntBASIC15.67■□□□□ 0.1
SLC28A1O00337 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC28A1O00337 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC28A1O00337 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC28A1O00337 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 AC092384.3-202ENST00000564646 2873 ntBASIC15.67■□□□□ 0.1
SLC28A1O00337 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SLC28A1O00337 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 AC104640.1-201ENST00000562617 2109 ntBASIC15.67■□□□□ 0.1
SLC28A1O00337 PRAL-201ENST00000624952 3286 ntBASIC15.67■□□□□ 0.1
SLC28A1O00337 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A1O00337 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A1O00337 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SLC28A1O00337 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC28A1O00337 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC28A1O00337 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC28A1O00337 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 AC140658.5-201ENST00000438532 169 ntBASIC15.66■□□□□ 0.1
SLC28A1O00337 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A1O00337 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A1O00337 AL662844.1-201ENST00000546340 181 ntBASIC15.66■□□□□ 0.1
SLC28A1O00337 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC28A1O00337 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.66■□□□□ 0.1
SLC28A1O00337 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A1O00337 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms