Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 HLA-H-201ENST00000383620 1096 ntBASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 AC092580.3-201ENST00000430932 139 ntBASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 AC020765.3-201ENST00000613051 740 ntBASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 SPTSSB-204ENST00000617024 1292 ntBASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 AC073592.8-201ENST00000624126 511 ntBASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA2E9PIF3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 AC241585.1-201ENST00000433527 519 ntBASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 AC002472.2-201ENST00000442739 958 ntBASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 TERF1P3-201ENST00000505638 1227 ntBASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 RN7SL204P-201ENST00000582831 262 ntBASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 FOXO1B-201ENST00000504678 1527 ntBASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 GGT3P-204ENST00000453783 1664 ntBASIC14.81□□□□□ -0.04
NPIPA2E9PIF3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms