Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 BICD1-207ENST00000551848 1962 ntBASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 AC007274.2-201ENST00000421675 662 ntBASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 AL596276.2-201ENST00000447525 331 ntBASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 AL031731.1-201ENST00000642131 2094 ntBASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 RN7SL736P-201ENST00000613111 269 ntBASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 AC011491.1-203ENST00000637688 543 ntBASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 AC135050.7-201ENST00000624508 2218 ntBASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TMEM88BA6NKF7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 RPL13AP19-201ENST00000434320 584 ntBASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 CNN2P10-201ENST00000443067 918 ntBASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 NUP210P1-202ENST00000504322 710 ntBASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 AC000095.1-201ENST00000603208 874 ntBASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 DRD5P1-201ENST00000456605 1438 ntBASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms