Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 AC011477.6-201ENST00000604980 1927 ntBASIC17.28■□□□□ 0.36
RCCD1A6NED2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 IGLL3P-201ENST00000412472 434 ntBASIC17.28■□□□□ 0.36
RCCD1A6NED2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.28■□□□□ 0.36
RCCD1A6NED2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 RN7SL275P-201ENST00000582762 335 ntBASIC17.28■□□□□ 0.36
RCCD1A6NED2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 AC005593.1-201ENST00000624894 515 ntBASIC17.28■□□□□ 0.36
RCCD1A6NED2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RCCD1A6NED2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCCD1A6NED2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RCCD1A6NED2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RCCD1A6NED2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.27■□□□□ 0.36
RCCD1A6NED2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 AC087481.3-201ENST00000602886 1894 ntBASIC17.27■□□□□ 0.36
RCCD1A6NED2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.27■□□□□ 0.36
RCCD1A6NED2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms