Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AC130686.1-201ENST00000622936 2466 ntBASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AL390719.1-204ENST00000412397 1219 ntBASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 FAM8A3P-201ENST00000427218 844 ntBASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SF1-220ENST00000626028 704 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 KRT8P44-201ENST00000441609 1350 ntBASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01558Q9Y6Z2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms