Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP4B1Q9Y6B7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 AC093909.1-201ENST00000504731 1122 ntBASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 OR7E14P-202ENST00000530490 1290 ntBASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 AP001005.1-201ENST00000571755 1248 ntBASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 AC025062.2-201ENST00000605477 670 ntBASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 AL589182.2-201ENST00000619332 1049 ntBASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4B1Q9Y6B7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 AC026748.1-201ENST00000624349 3251 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 LINC00895-201ENST00000629028 1637 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 AC067930.6-201ENST00000623257 4947 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 AL031284.1-201ENST00000419297 478 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 LAGE3P1-201ENST00000425356 484 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 AC139887.3-201ENST00000568585 713 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 AC107918.4-202ENST00000641623 219 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 AC002310.6-201ENST00000624451 1377 ntBASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AP4B1Q9Y6B7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
AP4B1Q9Y6B7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP4B1Q9Y6B7 AC148477.5-201ENST00000625164 1645 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms